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biowerkzeug •MD simulations

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MD simulations

https://forums.biowerkzeug.org/viewtopic.php?f=22&t=16

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MD simulations

Posted: Tue Aug 26, 2008 11:51 am
by anmj
When will it be possible to run MD simulations in HIPPO? I would like to compare the results from MC with corresponding ones from MD.

Re: MD simulations

Posted: Fri Aug 29, 2008 7:58 am
by martin
You can run normal MD (mode = MD simulation), the generalized Born membrane will be available in MD mode soon - needs some minor debugging... ;)

Re: MD simulations

Posted: Fri Nov 14, 2008 11:32 am
by kaihsu
Thanks to the Ulmschneider brothers for the tool Hippo. As I said elsewhere: ‘I wonder whether it is possible to implement parallel MD with implicit membranes, and how fast would that be?’ viewtopic.php?f=13&t=18
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