biowerkzeug

A non-exhaustive list of Molecular dynamics (MD) packages... please add your own. See also Wiki:Molecular Dynamics codes.

Freely* available for academics, including source code:

• Hippo* (see also the Hippo forum).
• Gromacs*
• CHARMM
• LAMMPS*
• [url=ttp://www.ks.uiuc.edu/Research/namd/]NAMD[/url]*
• Amber
• tinker*
• DL_POLY*
• GROMOS
• ORAC*
• Desmond*

Restricted access:

• Blue Matter, running on IBM's Blue Gene super computer