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- Announcements
This forum is used by developers and staff to announce important news about Hippo.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post Release of Hippo BETA rev 35
byoliver View the latest post
Sun Dec 07, 2008 8:59 pm
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- Installation
How to compile and install Hippo. You can also report architectures (hardware and operating system) on which you managed to get Hippo running and discuss tuning options for performance.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 2 Topics
- 5 Posts
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Last post Re: New version
bymartin View the latest post
Sat Dec 15, 2012 11:10 am
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- Simulation setup
Discussions on how to set up simulations, typically starting from a pdb file.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 10 Topics
- 34 Posts
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Last post Re: REMC hippo_input
bymartin View the latest post
Thu Oct 01, 2009 4:27 pm
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- Running simulations
You successfully prepared your system. Now: How do I tell Hippo to produce a trajectory from it? What parameters to choose? And what should I do when things go wrong.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 6 Topics
- 34 Posts
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Last post Re: rattle: too many constrai…
bymartin View the latest post
Thu Oct 20, 2011 2:13 pm
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- Analysis
After a successful calculation you want more than just to see the atoms wiggle: Here you can discuss how to use Hippo to compute observables from the simulation. For more general discussions on analysis of simulations see also the Molecular Simulations -> Analysis forum.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post Helicity problem/bug ??
bym.kalavera View the latest post
Wed Jun 17, 2009 4:52 pm
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- Force field parameters
Discussions about the force fields implemented in Hippo. For general force field discussions see Molecular Simulations -> Force fields.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post Re: spermine?
bykaihsu View the latest post
Thu Nov 13, 2008 11:53 am
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- Bugs
Please report bugs and crashes. Read the first post about reporting bugs, please. Depending on volume we may later switch to a dedicated bug tracking system.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post Re: Novice assistance
byoliver View the latest post
Sat Oct 18, 2008 6:13 pm
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- Feature requests
What would you like to see implemented in Hippo? Let the developers know. You can also use polls to have other users vote for your suggestions. Use one topic per request.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 6 Topics
- 9 Posts
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Last post collaboration
byniki View the latest post
Sun Jun 28, 2009 12:55 pm
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- Other Biomolecular Simulation communities
Let everyone else know about the native community for you favourite Biomolecular Simulation package. Use one topic per package.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post CHARMM
byoliver View the latest post
Sat Jul 05, 2008 12:04 am
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- Force fields
How and when to use a particular force field? Why would you choose one force field over the other? What are the merits, what are the caveats?[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 3 Topics
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Last post lipidbook - force field param…
byoliver View the latest post
Sun Jan 10, 2010 1:52 pm
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- Molecular simulation package advocacy
Tell us why you like to use package X for running biomolecular simulations. What are the advantages? What would you improve or would you like to have ported from another package Y into X?[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post List of Molecular Dynamics pa…
byoliver View the latest post
Wed Jul 02, 2008 12:26 am
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- Analysis
Discuss methods to obtain meaningful observables from simulation trajectories. You can share scripts or just ideas and links to other communities are very welcome, too. For Hippo-specific analysis have a look at the Hippo -> Analysis forum.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 4 Topics
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Last post Re: The Tilt
bym.kalavera View the latest post
Thu Jun 18, 2009 1:47 pm
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- Visualization
How to display biomolecules in motion: from rasmol to Alias Wavefront.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 2 Topics
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Last post Re: Visualization of the memb…
byoliver View the latest post
Tue Oct 06, 2009 3:09 pm
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- Wiki
Discussions about the biowerkzeug Wiki.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post Re: problem logging into the …
byoliver View the latest post
Wed Jul 28, 2010 1:01 pm
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- Forum
Discussions about the biowerkzeug forum (the one you are currently reading).[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
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Last post general "How To" forum?
byoliver View the latest post
Wed Aug 06, 2008 7:10 pm
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- White Noise
The place for off-topic discussions but please refrain from profanity, vulgarity and advertisements. Discussing the best place to drink beer in Oxford is ok, though.[phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
- 2 Topics
- 2 Posts
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Last post Biowerkzeug European Cooperat…
bykaihsu View the latest post
Wed Nov 12, 2008 3:33 pm
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