Molecular Simulations

Discussions about running and analyzing Molecular Simulations in general, without specific reference to particular software package.
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  • Other Biomolecular Simulation communities
    Let everyone else know about the native community for you favourite Biomolecular Simulation package. Use one topic per package. [phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
    2 Topics
    2 Posts
    Last post CHARMM
    by oliver View the latest post
    Sat Jul 05, 2008 12:04 am
  • Force fields
    How and when to use a particular force field? Why would you choose one force field over the other? What are the merits, what are the caveats? [phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
    3 Topics
    3 Posts
    Last post lipidbook - force field param…
    by oliver View the latest post
    Sun Jan 10, 2010 1:52 pm
  • Molecular simulation package advocacy
    Tell us why you like to use package X for running biomolecular simulations. What are the advantages? What would you improve or would you like to have ported from another package Y into X? [phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
    1 Topics
    1 Posts
    Last post List of Molecular Dynamics pa…
    by oliver View the latest post
    Wed Jul 02, 2008 12:26 am
  • Analysis
    Discuss methods to obtain meaningful observables from simulation trajectories. You can share scripts or just ideas and links to other communities are very welcome, too. For Hippo-specific analysis have a look at the Hippo -> Analysis forum. [phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
    4 Topics
    11 Posts
    Last post Re: The Tilt
    by m.kalavera View the latest post
    Thu Jun 18, 2009 1:47 pm
  • Visualization
    How to display biomolecules in motion: from rasmol to Alias Wavefront. [phpBB Debug] PHP Warning: in file [ROOT]/vendor/twig/twig/lib/Twig/Extension/Core.php on line 1275: count(): Parameter must be an array or an object that implements Countable
    2 Topics
    8 Posts
    Last post Re: Visualization of the memb…
    by oliver View the latest post
    Tue Oct 06, 2009 3:09 pm
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